Activates and completes the previously dead "analyst asks BLOCKING questions -> 01-questions.md -> Needs Input" path. Four coordinated changes, additive, under kill-switch, self-hosting scope, never-raise; STAGE_TRANSITIONS / QG_CHECKS / check_* / machine-verdict keys / DB schema are byte-for-byte UNCHANGED (the flow is a pre-gate engine branch, NOT a Quality Gate; 01-questions.md is a SIGNAL artifact, NOT a machine-verdict). - D1 contract + canon: analyst.md documents the 01-questions.md channel (blocking questions -> Needs Input, do NOT fabricate deliverables) + resume behaviour; new skeleton docs/_templates/01-questions.md; PIPELINE_DOCS.md manifest row + 01- prefix note. - D2 freshness-supersede (DQ-2): pure offline mtime predicate questions_active in the new leaf src/analyst_questions.py (a full FRESH package supersedes a stale untouched 01-questions.md -> no Needs-Input loop, AC-6). - D3 priority: questions take priority over "files ready" in _handle_analysis_approved_flow (_decide_analysis_outcome + _emit_analysis_*); off/out-of-scope runs the ORIGINAL byte-for-byte order (AC-9). - D4 auto-park: set_task_paused on Needs Input via the ORCH-124 pause axis so the repo serial-gate FIFO is not wedged while waiting for a human (AC-4); D5 resume + unpark (clear_task_paused) in handle_status_start (analysis branch). Flags (config.py, safe defaults): analyst_questions_gate_enabled / analyst_questions_gate_repos (empty -> self-hosting only) / analyst_needs_input_autopause_enabled. Tests: test_orch120_analyst_needs_input.py (TC-01 regress + TC-02/03/06/09/10), test_orch120_serial_gate_needs_input.py (TC-04), test_orch120_resume_unpark.py (TC-05), test_orch120_questions_artifact_canon.py (TC-08), assert in test_agent_prompts_canon.py (TC-07). Full suite green (2205 passed). Refs: ORCH-120 Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
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